Optimal Target Finder
Enter genomic DNA sequence to find CRISPR target sites:
(Omit header lines and special characters.)
Select genome
:
---- Drosophila melanogaster ----
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Drosophila melanogaster (reference genome, r_6)
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Drosophila melanogaster (vas-cas9 III, BDSC 51324)
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Drosophila melanogaster (nos-cas9 II, BDSC 78781)
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Drosophila melanogaster (nos-cas9 III, BDSC 78782)
---- Other Drosophila Species ----
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Drosophila ananassae (dana_r1.3_FB2011_07)
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Drosophila erecta (dere_r1.3_FB2011_08)
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Drosophila eugracilis (GCA_000236325.2)
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Drosophila grimshawi (dgri_r1.3_FB2010_02)
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Drosophila mauritiana (Dmau_MS17)
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Drosophila mojavensis (dmoj_r1.3_FB2011_05)
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Drosophila persimilis (dper_r1.3_FB2010_02)
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Drosophila pseudoobscura (dpse_r3.1_FB2013_03)
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Drosophila sechellia (droSec1)
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Drosophila simulans (DsimV2)
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Drosophila simulans (droSim1)
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Drosophila virilis (droVir3)
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Drosophila willistoni (dwil_r1.3_FB2010_02)
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Drosophila yakuba (droYak2)
---- Other Organisms ----
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Acyrthosiphon pisum (2)
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Aedes aegypti (AaegL5.0 GCA_002204515.1)
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Anopheles gambiae (strain M) (AgamM1)
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Anopheles gambiae (strain S) (AgamS1)
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Apis cerana cerana (GCA_002290385.1)
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Apis mellifera (apiMel3)
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Bombus impatiens (GCA_000188095.2)
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Caenorhabditis elegans (ce10)
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Ceratitis capitata (1.1)
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Daphnia pulex (GCA_900092285.1_ASM90009228v1)
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Daphnia pulex (GCA_000187875.1)
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Lutzomyia longipalpis (GCA_000265325.1)
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Manduca sexta (GCA_000262585.1)
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Nasonia vitripennis (2.1)
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Oncopeltus fasciatus (GCA_000696205.2)
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Paracoccus denitrificans (GCA_000203895.1)
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Rhodnius prolixus (GCA_000181055.3)
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Schistosoma mansoni (GCA_000237925.2)
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Tribolium castaneum (Tcas 4.0 draft)
Select guide length (nt)
:
20
19
18
17
16
Find:
All CRISPR targets
CRISPR targets with 5' G
CRISPR targets with 5' GG
Find CRISPR Targets
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Optimal Target Finder